2GH0 Hormone Growth Factor date Mar 24, 2006
title Growth Factorreceptor Complex
authors X.Q.Wang
compound source
Molecule: Artemin
Chain: C, D
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111

Molecule: Gdnf Family Receptor Alpha-3
Chain: A, B
Synonym: Gfr-Alpha-3
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gfra3
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
symmetry Space Group: P 1 21 1
R_factor 0.219 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
73.678 41.460 119.863 90.00 103.56 90.00
method X-Ray Diffractionresolution 1.92 Å
ligand BMA, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


Primary referenceStructure of artemin complexed with its receptor GFRalpha3: convergent recognition of glial cell line-derived neurotrophic factors., Wang X, Baloh RH, Milbrandt J, Garcia KC, Structure. 2006 Jun;14(6):1083-92. PMID:16765900
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (2gh0.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 2GH0
  • CSU: Contacts of Structural Units for 2GH0
  • Likely Quarternary Molecular Structure file(s) for 2GH0
  • Structure Factors (434 Kb)
  • Retrieve 2GH0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GH0 from S2C, [Save to disk]
  • Re-refined 2gh0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GH0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GH0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2GH0, from MSDmotif at EBI
  • Fold representative 2gh0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gh0_B] [2gh0_D] [2gh0_A] [2gh0] [2gh0_C]
  • SWISS-PROT database: [Q5T4W7] [O60609]
  • Domain organization of [ARTN_HUMAN] [GFRA3_HUMAN] by SWISSPFAM
  • Domains found in 2GH0: [GDNF] [TGFB ] by SMART
  • Other resources with information on 2GH0
  • Community annotation for 2GH0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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