2GP5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AKG, FE2, ZN enzyme
Primary referenceStructural insights into histone demethylation by JMJD2 family members., Chen Z, Zang J, Whetstine J, Hong X, Davrazou F, Kutateladze TG, Simpson M, Mao Q, Pan CH, Dai S, Hagman J, Hansen K, Shi Y, Zhang G, Cell. 2006 May 19;125(4):691-702. Epub 2006 May 4. PMID:16677698
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (2gp5.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (2gp5.pdb2.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 2GP5
  • CSU: Contacts of Structural Units for 2GP5
  • Likely Quarternary Molecular Structure file(s) for 2GP5
  • Structure Factors (394 Kb)
  • Retrieve 2GP5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GP5 from S2C, [Save to disk]
  • Re-refined 2gp5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GP5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gp5] [2gp5_A] [2gp5_B]
  • SWISS-PROT database: [O75164]
  • Domains found in 2GP5: [JmjC] [JmjN ] by SMART

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