OCA Atlas for 2GRA

2GRA

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GLU, NAP

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, A, D, C, E

Primary reference

Crystal structure of human pyrroline-5-carboxylate reductase., Meng Z, Lou Z, Liu Z, Li M, Zhao X, Bartlam M, Rao Z, J Mol Biol. 2006 Jun 23;359(5):1364-77. Epub 2006 May 11. PMID:16730026

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (230 Kb) [Save to disk]

Biological Unit Coordinates (2gra.pdb1.gz) 48 Kb

Biological Unit Coordinates (2gra.pdb2.gz) 46 Kb

Biological Unit Coordinates (2gra.pdb3.gz) 47 Kb

Biological Unit Coordinates (2gra.pdb4.gz) 47 Kb

Biological Unit Coordinates (2gra.pdb5.gz) 48 Kb

Biological Unit Coordinates (2gra.pdb6.gz) 92 Kb

Biological Unit Coordinates (2gra.pdb7.gz) 91 Kb

LPC: Ligand-Protein Contacts for 2GRA

CSU: Contacts of Structural Units for 2GRA

Likely Quarternary Molecular Structure file(s) for 2GRA

Structure Factors (744 Kb)

Retrieve 2GRA in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2GRA from S2C, [Save to disk]

Re-refined 2gra structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GRA in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gra] [2gra_A] [2gra_B] [2gra_C] [2gra_D] [2gra_E]

SWISS-PROT database: [P32322]

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