2GS7 Transferase date Apr 25, 2006
title Crystal Structure Of The Inactive Egfr Kinase Domain In Comp Amp-Pnp
authors X.Zhang, J.Gureasko, K.Shen, P.A.Cole, J.Kuriyan
compound source
Molecule: Epidermal Growth Factor Receptor
Chain: A, B
Fragment: Kinase Domain, Residues 696-1022
Synonym: Receptor Tyrosine-Protein Kinase Erbb-1
Ec: 2.7.10.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Egfr, Erbb1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculorvirus
Expression_system_plasmid: Pfastbac-Ht
symmetry Space Group: P 1 21 1
R_factor 0.233 R_Free 0.298
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.601 85.253 78.327 90.00 96.36 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand ANP, IOD, MG enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAn allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor., Zhang X, Gureasko J, Shen K, Cole PA, Kuriyan J, Cell. 2006 Jun 16;125(6):1137-49. PMID:16777603
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (101 Kb) [Save to disk]
  • Biological Unit Coordinates (2gs7.pdb1.gz) 94 Kb
  • LPC: Ligand-Protein Contacts for 2GS7
  • CSU: Contacts of Structural Units for 2GS7
  • Likely Quarternary Molecular Structure file(s) for 2GS7
  • Structure Factors (186 Kb)
  • Retrieve 2GS7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GS7 from S2C, [Save to disk]
  • Re-refined 2gs7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GS7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GS7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GS7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gs7_A] [2gs7_B] [2gs7]
  • SWISS-PROT database: [P00533]
  • Domain organization of [EGFR_HUMAN] by SWISSPFAM
  • Domain found in 2GS7: [TyrKc ] by SMART
  • Other resources with information on 2GS7
  • Community annotation for 2GS7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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