2J3U	Sugar Binding Protein	date	Aug 23, 2006
title	L-Ficolin Complexed To Galactose
authors	V.Garlatti, C.Gaboriaud
compound		source
Molecule: Ficolin-2 Chain: A, B, C, D, E, F Fragment: Binding Domain, Residues 97-313 Synonym: Collagenfibrinogen Domain-Containing Protein 2, F Ficolin B, Serum Lectin P35, Ebp-37, Hucolin, L-Ficolin; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Plasma Expression_system: Trichoplusia Ni Expression_system_taxid: 7111 Expression_system_cell_line: High Five Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 32	R_factor 0.188 R_Free 0.237
crystal cell	length a length b length c angle alpha angle beta angle gamma 96.080 96.080 140.980 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.15 Å
ligand	ACT, CA, EPE, GLA, MAN, NAG, P4C	enzyme
Primary reference	Structural insights into the innate immune recognition specificities of L- and H-ficolins., Garlatti V, Belloy N, Martin L, Lacroix M, Matsushita M, Endo Y, Fujita T, Fontecilla-Camps JC, Arlaud GJ, Thielens NM, Gaboriaud C, EMBO J. 2007 Jan 24;26(2):623-33. Epub 2007 Jan 11. PMID:17215869

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (227 Kb) [Save to disk] Biological Unit Coordinates (2j3u.pdb1.gz) 110 Kb Biological Unit Coordinates (2j3u.pdb2.gz) 110 Kb LPC: Ligand-Protein Contacts for 2J3U CSU: Contacts of Structural Units for 2J3U Likely Quarternary Molecular Structure file(s) for 2J3U Structure Factors (602 Kb) Retrieve 2J3U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J3U from S2C, [Save to disk] Re-refined 2j3u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2J3U in 3D

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Visual 3D analysis of 2J3U

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2J3U, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j3u_D] [2j3u_E] [2j3u_F] [2j3u] [2j3u_C] [2j3u_B] [2j3u_A] SWISS-PROT database: [Q15485] Domain organization of [FCN2_HUMAN] by SWISSPFAM Domain found in 2J3U: [FBG ] by SMART

Other resources with information on 2J3U

Community annotation for 2J3U at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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