2J86 Hydrolase date Oct 19, 2006
title Structural Analysis Of The Pp2c Family Phosphatase Tppha Of Thermosynechococcus Elongatus
authors C.Schlicker, N.Kloft, K.Forchhammer, S.Becker
compound source
Molecule: Protein Serine-Threonine Phosphatase
Chain: A, B
Synonym: Tppha
Engineered: Yes
Organism_scientific: Synechococcus Elongatus
Organism_taxid: 32046
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet32a
Expression_system_plasmid: Pet32a-Tppha-1-240
symmetry Space Group: P 41 21 2
R_factor 0.240 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
113.290 113.290 88.610 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.05 Å
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural analysis of the PP2C phosphatase tPphA from Thermosynechococcus elongatus: a flexible flap subdomain controls access to the catalytic site., Schlicker C, Fokina O, Kloft N, Grune T, Becker S, Sheldrick GM, Forchhammer K, J Mol Biol. 2008 Feb 15;376(2):570-81. Epub 2007 Dec 5. PMID:18164312
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (2j86.pdb1.gz) 36 Kb
  • Biological Unit Coordinates (2j86.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 2J86
  • CSU: Contacts of Structural Units for 2J86
  • Likely Quarternary Molecular Structure file(s) for 2J86
  • Structure Factors (103 Kb)
  • Retrieve 2J86 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J86 from S2C, [Save to disk]
  • Re-refined 2j86 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2J86 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2J86
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2J86, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j86] [2j86_B] [2j86_A]
  • SWISS-PROT database: [Q8DGS1]
  • Domain organization of [Q8DGS1_THEEB] by SWISSPFAM
  • Domains found in 2J86: [PP2C_SIG] [PP2Cc ] by SMART
  • Other resources with information on 2J86
  • Community annotation for 2J86 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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