2J8B	Lipid Binding Protein	date	Oct 24, 2006
title	High Resolution Structure Of Human Cd59
authors	K.J.Leath, S.Johnson, P.Roversi, B.P.Morgan, R.A.G.Smith, S.M.Lea
compound		source
Molecule: Cd59 Glycoprotein Chain: A Fragment: Mature Polypeptide, Residues 26-103 Synonym: Membrane Attack Complex Inhibition Factor, Macif, Inhibitory Protein, Mac-Ip, Protectin, Mem43 Antigen, Membr Inhibitor Of Reactive Lysis, Mirl, 20 Kda Homologous Restri Factor, Hrf-20,Hrf20,1f5 Antigen, Cd59; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Cell: Lymphocytes, Erythrocytes, Platelets, Endothelia, Epi Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Ut5600 (De3) Expression_system_plasmid: Pet59-06 Other_details: Purified From Inclusion Bodies After Express Escherichia Coli
symmetry	Space Group: P 21 21 21	R_factor 0.164 R_Free 0.197
crystal cell	length a length b length c angle alpha angle beta angle gamma 31.948 45.918 46.033 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.15 Å
note	2J8B is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	High-resolution structures of bacterially expressed soluble human CD59., Leath KJ, Johnson S, Roversi P, Hughes TR, Smith RA, Mackenzie L, Morgan BP, Lea SM, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Aug 1;63(Pt, 8):648-52. Epub 2007 Jul 28. PMID:17671359

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk] Biological Unit Coordinates (2j8b.pdb1.gz) 31 Kb CSU: Contacts of Structural Units for 2J8B Structure Factors (201 Kb) Retrieve 2J8B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J8B from S2C, [Save to disk] Re-refined 2j8b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2J8B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2J8B

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2J8B, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j8b] [2j8b_A] SWISS-PROT database: [P13987] Domain organization of [CD59_HUMAN] by SWISSPFAM Domain found in 2J8B: [LU ] by SMART

Other resources with information on 2J8B

Community annotation for 2J8B at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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