2JI4 Transferase date Feb 26, 2007
title Human Phosphoribosylpyrophosphate Synthetase - Associated Pr (Pap41)
authors M.Moche, L.Lehtio, C.Arrowsmith, H.Berglund, R.Busam, R.Collins, L.G.Dahlgren, A.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hamma B.M.Hallberg, L.Holmberg-Schiavone, I.Johansson, T.Karlberg, T.Kotenyova, T.Nyman, D.Ogg, C.Persson, J.Sagemark, P.Stenmark, M.Sundstrom, A.G.Thorsell, S.Van Den Berg, J.Weigelt, P.Nordlun
compound source
Molecule: Phosphoribosyl Pyrophosphate Synthetase-Associate 2;
Chain: A
Synonym: Phosphoribosylpyrophosphate Synthetase-Associated - Pap41,Prpp Synthetase-Associated Protein 2,41 Kda Phosphoribosypyrophosphate Synthetase-Associated Protein, P
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: H 3 2
R_factor 0.206 R_Free 0.273
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.400 104.400 192.000 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.55 Å
ligand CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • enzyme inhibitor activity


    • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (2ji4.pdb1.gz) 278 Kb
  • LPC: Ligand-Protein Contacts for 2JI4
  • CSU: Contacts of Structural Units for 2JI4
  • Likely Quarternary Molecular Structure file(s) for 2JI4
  • Structure Factors (193 Kb)
  • Retrieve 2JI4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JI4 from S2C, [Save to disk]
  • Re-refined 2ji4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2JI4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JI4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JI4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ji4] [2ji4_A]
  • SWISS-PROT database: [O60256]
  • Domain organization of [KPRB_HUMAN] by SWISSPFAM
  • Domain found in 2JI4: [Pribosyltran_N ] by SMART
    • Other resources with information on 2JI4
  • Community annotation for 2JI4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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