2JIS Lyase date Jun 30, 2007
title Human Cysteine Sulfinic Acid Decarboxylase (Csad) In Complex With Plp.
authors R.Collins, M.Moche, C.Arrowsmith, H.Berglund, R.Busam, L.G.Dahlgren, A.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, B.M.Hallberg, I.Johansson, A.Kallas, T.Karlberg, T.Kotenyova, L.Lehtio, P.Nordlund, T.Nyman, D.Ogg, C.Persson, J.Sagemark, P.Stenmark, M.Sundstrom, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, J.Weigelt, M.Welin, L.Holmberg-Schiavone, Structural Genomics Consortium (Sgc)
compound source
Molecule: Cysteine Sulfinic Acid Decarboxylase
Chain: A, B
Synonym: Sulfinoalanine Decarboxylase, Cysteine-Sulfinate Decarboxylase;
Ec: 4.1.1.29
Engineered: Yes
Other_details: Construct Contains An N-Terminal Hexahistidine Tail
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pnic-Bsa4
Other_details: Mammalian Gene Collection (Mgc)
symmetry Space Group: P 21 21 21
R_factor 0.153 R_Free 0.179
crystal
cell
length a length b length c angle alpha angle beta angle gamma
65.318 100.636 163.104 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.6 Å
ligand NO3, PLP enzyme Lyase E.C.4.1.1.29 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk]
  • Biological Unit Coordinates (2jis.pdb1.gz) 176 Kb
  • LPC: Ligand-Protein Contacts for 2JIS
  • CSU: Contacts of Structural Units for 2JIS
  • Likely Quarternary Molecular Structure file(s) for 2JIS
  • Structure Factors (1867 Kb)
  • Retrieve 2JIS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JIS from S2C, [Save to disk]
  • Re-refined 2jis structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JIS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JIS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2JIS, from MSDmotif at EBI
  • Fold representative 2jis from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jis_A] [2jis_B] [2jis]
  • SWISS-PROT database: [Q9Y600]
  • Domain organization of [CSAD_HUMAN] by SWISSPFAM
  • Other resources with information on 2JIS
  • Community annotation for 2JIS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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