2KGH Toxin date Mar 12, 2009
title Solution Structure Of Brachyperma Ruhnaui Toxin 2
authors G.Corzo, C.Bernard, H.Clement, F.Bosmans, J.Tygat, L.D.Possani, H. A.Alagon
compound source
Molecule: Venom Peptide 2
Chain: A
 Organism_scientific: Brachypelma Ruhnaui
Organism_common: Mexican Golden Redrump Tarantula
Organism_taxid: 503929
methodSolution NMR
note 2KGH is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceInsecticidal peptides from the theraposid spider Brachypelma albiceps: an NMR-based model of Ba2., Corzo G, Bernard C, Clement H, Villegas E, Bosmans F, Tytgat J, Possani LD, Darbon H, Alagon A, Biochim Biophys Acta. 2009 Aug;1794(8):1190-6. Epub 2009 Apr 15. PMID:19374957
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (253 Kb) [Save to disk]
  • Biological Unit Coordinates (2kgh.pdb1.gz) 13 Kb
  • CSU: Contacts of Structural Units for 2KGH
  • Original NMR restraints for 2KGH from PDB
  • Retrieve 2KGH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2KGH from S2C, [Save to disk]
    • View 2KGH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2KGH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2KGH, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2kgh_A] [2kgh]
  • SWISS-PROT database: [P85504]
  • Domain organization of [TXP2_BRARH] by SWISSPFAM
    • Other resources with information on 2KGH
  • Community annotation for 2KGH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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