2M5B The NMR structure of the BID-BAK complex date
authors Moldoveanu, T., Grace, C.R., Kriwacki, R.W., Green, D.R.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MK8, NH2, NLE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceBID-induced structural changes in BAK promote apoptosis., Moldoveanu T, Grace CR, Llambi F, Nourse A, Fitzgerald P, Gehring K, Kriwacki RW, Green DR, Nat Struct Mol Biol. 2013 May;20(5):589-97. doi: 10.1038/nsmb.2563. Epub 2013 Apr, 21. PMID:23604079
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1059 Kb) [Save to disk]
  • Biological Unit Coordinates (2m5b.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 2M5B
  • CSU: Contacts of Structural Units for 2M5B
  • Original NMR restraints for 2M5B from PDB
  • Retrieve 2M5B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M5B from S2C, [Save to disk]
  • View 2M5B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M5B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M5B, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m5b] [2m5b_B] [2m5b_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2M5B: [BCL ] by SMART
  • Other resources with information on 2M5B
  • Community annotation for 2M5B at PDBWiki (http://pdbwiki.org)

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