2NYT		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component B, C, A, D
Primary reference	The APOBEC-2 crystal structure and functional implications for the deaminase AID., Prochnow C, Bransteitter R, Klein MG, Goodman MF, Chen XS, Nature. 2006 Dec 24;. PMID:17187054

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk] Biological Unit Coordinates (2nyt.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 2NYT CSU: Contacts of Structural Units for 2NYT Likely Quarternary Molecular Structure file(s) for 2NYT Structure Factors (229 Kb) Retrieve 2NYT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2NYT from S2C, [Save to disk] Re-refined 2nyt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2NYT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2nyt] [2nyt_A] [2nyt_B] [2nyt_C] [2nyt_D] SWISS-PROT database: [Q9Y235]

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---