2OO8	Transferase	date	Jan 25, 2007
title	Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors
authors	S.F.Bellon, J.Kim
compound		source
Molecule: Angiopoietin-1 Receptor Chain: X Fragment: Kinase Domain Synonym: Tyrosine-Protein Kinase Receptor Tie-2, Htie2, Tyr Protein Kinase Receptor Tek, P140 Tek, Tunica Interna Endot Cell Kinase, Cd202b Antigen; Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tek, Tie2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 41 21 2	R_factor 0.233 R_Free 0.279
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.604 62.604 181.043 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	RAJ BindingDB	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component X
Primary reference	Synthesis, structural analysis, and SAR studies of triazine derivatives as potent, selective Tie-2 inhibitors., Hodous BL, Geuns-Meyer SD, Hughes PE, Albrecht BK, Bellon S, Caenepeel S, Cee VJ, Chaffee SC, Emery M, Fretland J, Gallant P, Gu Y, Johnson RE, Kim JL, Long AM, Morrison M, Olivieri PR, Patel VF, Polverino A, Rose P, Wang L, Zhao H, Bioorg Med Chem Lett. 2007 May 15;17(10):2886-9. Epub 2007 Feb 25. PMID:17350837

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (2oo8.pdb1.gz) 44 Kb LPC: Ligand-Protein Contacts for 2OO8 CSU: Contacts of Structural Units for 2OO8 Likely Quarternary Molecular Structure file(s) for 2OO8 Structure Factors (177 Kb) Retrieve 2OO8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OO8 from S2C, [Save to disk] Re-refined 2oo8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OO8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OO8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OO8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2oo8] [2oo8_X] SWISS-PROT database: [Q02763] Domain organization of [TIE2_HUMAN] by SWISSPFAM Domain found in 2OO8: [TyrKc ] by SMART

Other resources with information on 2OO8

Community annotation for 2OO8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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