2PHH Oxidoreductase date Jun 19, 1989
title The Coenzyme Analogue Adenosine 5-Diphosphoribose Displaces Active Site Of P-Hydroxybenzoate Hydroxylase. An X-Ray Crystallographic Investigation
authors J.M.Van Derlaan, J.Drenth, W.G.J.Hol
compound source
Molecule: P-Hydroxybenzoate Hydroxylase
Chain: A
Ec: 1.14.13.2
Engineered: Yes
Organism_scientific: Pseudomonas Fluorescens
Organism_taxid: 294
symmetry Space Group: C 2 2 21
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.700 146.400 89.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand APR, PHB enzyme Oxidoreductase E.C.1.14.13.2 BRENDA
related structures by homologous chain: 1CJ2, 1PBF
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe coenzyme analogue adenosine 5-diphosphoribose displaces FAD in the active site of p-hydroxybenzoate hydroxylase. An x-ray crystallographic investigation., van der Laan JM, Schreuder HA, Swarte MB, Wierenga RK, Kalk KH, Hol WG, Drenth J, Biochemistry 1989 Sep 5;28(18):7199-205. PMID:2819062
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (2phh.pdb1.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 2PHH
  • CSU: Contacts of Structural Units for 2PHH
  • Likely Quarternary Molecular Structure file(s) for 2PHH
  • Retrieve 2PHH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PHH from S2C, [Save to disk]
  • View 2PHH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PHH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2PHH, from MSDmotif at EBI
  • Genome occurence of 2PHH's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2phh_1, region 1-173,276-391 [Jmol] [rasmolscript] [script source]
        - Domain d2phh_2, region 174-275 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2phh_A] [2phh]
  • SWISS-PROT database: [P00438]
  • Domain organization of [PHHY_PSEFL] by SWISSPFAM
  • Other resources with information on 2PHH
  • Community annotation for 2PHH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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