2PJL Transcription date Apr 16, 2007
title Crystal Structure Of Human Estrogen-Related Receptor Alpha I With A Synthetic Inverse Agonist Reveals Its Novel Molecula Mechanism
authors J.Kallen
compound source
Molecule: Steroid Hormone Receptor Err1
Chain: A, B
Fragment: Ligand Binding Domain
Synonym: Estrogen-Related Receptor, Alpha, Err- Alpha, Estr Receptor-Like 1;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Esrra, Err1, Esrl1, Nr3b1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: H 3
R_factor 0.219 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.465 96.465 134.590 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand 047 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of human estrogen-related receptor alpha in complex with a synthetic inverse agonist reveals its novel molecular mechanism., Kallen J, Lattmann R, Beerli R, Blechschmidt A, Blommers MJ, Geiser M, Ottl J, Schlaeppi JM, Strauss A, Fournier B, J Biol Chem. 2007 Aug 10;282(32):23231-9. Epub 2007 Jun 6. PMID:17556356
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (2pjl.pdb1.gz) 217 Kb
  • LPC: Ligand-Protein Contacts for 2PJL
  • CSU: Contacts of Structural Units for 2PJL
  • Likely Quarternary Molecular Structure file(s) for 2PJL
  • Structure Factors (168 Kb)
  • Retrieve 2PJL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PJL from S2C, [Save to disk]
  • Re-refined 2pjl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PJL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2PJL
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2PJL, from MSDmotif at EBI
  • Fold representative 2pjl from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pjl_A] [2pjl] [2pjl_B]
  • SWISS-PROT database: [P11474]
  • Domain organization of [ERR1_HUMAN] by SWISSPFAM
  • Domain found in 2PJL: [HOLI ] by SMART
  • Other resources with information on 2PJL
  • Community annotation for 2PJL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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