2Q21 Oncogene Protein date Sep 25, 1991
title Crystal Structures At 2.2 Angstroms Resolution Of The Cataly Domains Of Normal Ras Protein And An Oncogenic Mutant Compl Gsp
authors S.H.Kim
compound source
Molecule: C-H-Ras P21 Protein Catalytic Domain
Chain: A
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system_vector_type: Plasmid
symmetry Space Group: P 65 2 2
R_factor 0.192 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
83.200 83.200 105.100 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand GDP, MG enzyme
note 2Q21 supersedes 3P21
related structures by homologous chain: 1AGP, 421P
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures at 2.2 A resolution of the catalytic domains of normal ras protein and an oncogenic mutant complexed with GDP., Tong LA, de Vos AM, Milburn MV, Kim SH, J Mol Biol 1991 Feb 5;217(3):503-16. PMID:1899707
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (2q21.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 2Q21
  • CSU: Contacts of Structural Units for 2Q21
  • Likely Quarternary Molecular Structure file(s) for 2Q21
  • Retrieve 2Q21 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q21 from S2C, [Save to disk]
  • View 2Q21 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q21
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q21, from MSDmotif at EBI
  • Genome occurence of 2Q21's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2q21__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q21_A] [2q21]
  • SWISS-PROT database: [P01112]
  • Domain organization of [RASH_HUMAN] by SWISSPFAM
  • Domain found in 2Q21: [RAS ] by SMART
  • Other resources with information on 2Q21
  • Community annotation for 2Q21 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 2Q21 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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