2R59 Hydrolase date Sep 03, 2007
title Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041
authors F.Tholander, J.Z.Haeggstrom, M.Thunnissen, A.Muroya, B.P.Roques, M.C.Fournie-Zaluski
compound source
Molecule: Leukotriene A-4 Hydrolase
Chain: A
Synonym: Lta-4 Hydrolase, Leukotriene A4, Hydrolase
Ec: 3.3.2.6
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Gene: Lta4h, Lta4
Expression_system: Escherichia Coli
Expression_system_strain: Jm101
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pt7t3
symmetry Space Group: P 21 21 21
R_factor 0.175 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.210 87.230 99.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.89 Å
ligand ACY, PH0, YB, ZN enzyme Hydrolase E.C.3.3.2.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design., Tholander F, Muroya A, Roques BP, Fournie-Zaluski MC, Thunnissen MM, Haeggstrom JZ, Chem Biol. 2008 Sep 22;15(9):920-9. PMID:18804029
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (2r59.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 2R59
  • CSU: Contacts of Structural Units for 2R59
  • Likely Quarternary Molecular Structure file(s) for 2R59
  • Structure Factors (625 Kb)
  • Retrieve 2R59 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R59 from S2C, [Save to disk]
  • Re-refined 2r59 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R59 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R59
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2R59, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r59] [2r59_A]
  • SWISS-PROT database: [P09960]
  • Domain organization of [LKHA4_HUMAN] by SWISSPFAM
  • Domain found in 2R59: [Leuk-A4-hydro_C ] by SMART
  • Other resources with information on 2R59
  • Community annotation for 2R59 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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