2RKQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of Drosophila PGRP-SD suggests binding to DAP-type but not lysine-type peptidoglycan., Leone P, Bischoff V, Kellenberger C, Hetru C, Royet J, Roussel A, Mol Immunol. 2008 May;45(9):2521-30. Epub 2008 Mar 4. PMID:18304640
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (2rkq.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2RKQ
  • Likely Quarternary Molecular Structure file(s) for 2RKQ
  • Structure Factors (180 Kb)
  • Retrieve 2RKQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RKQ from S2C, [Save to disk]
  • Re-refined 2rkq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2RKQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rkq] [2rkq_A]
  • SWISS-PROT database: [Q9VS97]
  • Domains found in 2RKQ: [Ami_2] [PGRP ] by SMART

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