2RQO Toxin date Sep 03, 2009
title Solution Structure Of Polytheonamide B
authors N.Hamada, S.Matsunaga, M.Fujiwara, K.Fujjita, H.Hirota, R.Schmuck P.Guntert, N.Fusetani
compound source
Molecule: Polytheonamide B
Chain: A
 Organism_scientific: Theonella Swinhoei
Organism_taxid: 73791
methodSolution NMR
ligand 2TL, DAL, DHV, DSG, DSN, HTN, HVA, I2M, LMQ, M2S, MHE, MND, TBG, TDD enzyme
Primary referenceSolution Structure of Polytheonamide B, a Highly Cytotoxic Nonribosomal Polypeptide from Marine Sponge., Hamada T, Matsunaga S, Fujiwara M, Fujita K, Hirota H, Schmucki R, Guntert P, Fusetani N, J Am Chem Soc. 2010 Aug 26. PMID:20795624
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (278 Kb) [Save to disk]
  • Biological Unit Coordinates (2rqo.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 2RQO
  • CSU: Contacts of Structural Units for 2RQO
  • Original NMR restraints for 2RQO from PDB
  • Retrieve 2RQO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RQO from S2C, [Save to disk]
    • View 2RQO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RQO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RQO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rqo] [2rqo_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2RQO
  • Community annotation for 2RQO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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