2SBL Oxidoreductase date Jul 22, 1993
title The Three-Dimensional Structure Of An Arachidonic Acid 15-Li
authors L.M.Amzel, J.C.Boyington
compound source
Molecule: Lipoxygenase-1
Chain: B, A
Ec: 1.13.11.12
Engineered: Yes
Organism_scientific: Glycine Max
Organism_common: Soybean
Organism_taxid: 3847
symmetry Space Group: C 1 2 1
R_factor 0.173 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
184.500 125.600 94.700 90.00 102.90 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand FE enzyme Oxidoreductase E.C.1.13.11.12 BRENDA
related structures by homologous chain: 1HU9, 1LNH
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe three-dimensional structure of an arachidonic acid 15-lipoxygenase., Boyington JC, Gaffney BJ, Amzel LM, Science 1993 Jun 4;260(5113):1482-6. PMID:8502991
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (260 Kb) [Save to disk]
  • Biological Unit Coordinates (2sbl.pdb1.gz) 130 Kb
  • Biological Unit Coordinates (2sbl.pdb2.gz) 128 Kb
  • LPC: Ligand-Protein Contacts for 2SBL
  • CSU: Contacts of Structural Units for 2SBL
  • Likely Quarternary Molecular Structure file(s) for 2SBL
  • Retrieve 2SBL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2SBL from S2C, [Save to disk]
  • View 2SBL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2SBL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2SBL, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2sblb1, region B:150-839 [Jmol] [rasmolscript] [script source]
        - Domain d2sblb2, region B:7-149 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2sbl_B] [2sbl] [2sbl_A]
  • SWISS-PROT database: [P08170]
  • Domain organization of [LOX1_SOYBN] by SWISSPFAM
  • Domain found in 2SBL: [LH2 ] by SMART
  • Other resources with information on 2SBL
  • Community annotation for 2SBL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science