2SDF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 30 Modelsresolution
related structures by homologous chain: 1VMC
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure and basis for functional activity of stromal cell-derived factor-1; dissociation of CXCR4 activation from binding and inhibition of HIV-1., Crump MP, Gong JH, Loetscher P, Rajarathnam K, Amara A, Arenzana-Seisdedos F, Virelizier JL, Baggiolini M, Sykes BD, Clark-Lewis I, EMBO J 1997 Dec 1;16(23):6996-7007. PMID:9384579
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (545 Kb) [Save to disk]
  • Biological Unit Coordinates (2sdf.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2SDF
  • Retrieve 2SDF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2SDF from S2C, [Save to disk]
  • View 2SDF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2sdf] [2sdf_A]
  • SWISS-PROT database: [P48061]
  • Domain found in 2SDF: [SCY ] by SMART

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