2VAD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, CRQ, EDO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural rearrangements near the chromophore influence the maturation speed and brightness of DsRed variants., Strongin DE, Bevis B, Khuong N, Downing ME, Strack RL, Sundaram K, Glick BS, Keenan RJ, Protein Eng Des Sel. 2007 Oct 25;. PMID:17962222
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2vad.pdb1.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 2VAD
  • CSU: Contacts of Structural Units for 2VAD
  • Likely Quarternary Molecular Structure file(s) for 2VAD
  • Structure Factors (351 Kb)
  • Retrieve 2VAD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VAD from S2C, [Save to disk]
  • Re-refined 2vad structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VAD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vad] [2vad_A]
  • SWISS-PROT database: [Q9U6Y8]

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