2VI5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K, PO4, Y19 enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, F, D, E, J, B, H, I, C, A


Primary referenceA New Series of N-[2,4-Dioxo-6-d-ribitylamino-1,2,3,4-tetrahydropyrimidin-5-yl]oxalamic Acid Derivatives as Inhibitors of Lumazine Synthase and Riboflavin Synthase: Design, Synthesis, Biochemical Evaluation, Crystallography, and Mechanistic Implications., Zhang Y, Illarionov B, Morgunova E, Jin G, Bacher A, Fischer M, Ladenstein R, Cushman M, J Org Chem. 2008 Apr 4;73(7):2715-2724. Epub 2008 Mar 11. PMID:18331058
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (237 Kb) [Save to disk]
  • Biological Unit Coordinates (2vi5.pdb1.gz) 116 Kb
  • Biological Unit Coordinates (2vi5.pdb2.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 2VI5
  • CSU: Contacts of Structural Units for 2VI5
  • Likely Quarternary Molecular Structure file(s) for 2VI5
  • Structure Factors (496 Kb)
  • Retrieve 2VI5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VI5 from S2C, [Save to disk]
  • Re-refined 2vi5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VI5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vi5_H] [2vi5_I] [2vi5_J] [2vi5] [2vi5_A] [2vi5_B] [2vi5_C] [2vi5_D] [2vi5_E] [2vi5_F] [2vi5_G]
  • SWISS-PROT database: [P66034]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science