2VIK REFINED STRUCTURE OF THE ACTIN-SEVERING DOMAIN VILLIN 14T, DETERMINED BY SOLUTION NMR, MINIMIZED AVERAGE STRUCTURE date
authors Markus, M.A., Matsudaira, P., Wagner, G.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
related structures by homologous chain: 1P8Z, 2VIL
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined structure of villin 14T and a detailed comparison with other actin-severing domains., Markus MA, Matsudaira P, Wagner G, Protein Sci 1997 Jun;6(6):1197-209. PMID:9194180
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (2vik.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 2VIK
  • Original NMR restraints for 2VIK from PDB
  • Retrieve 2VIK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VIK from S2C, [Save to disk]
  • View 2VIK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2VIK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VIK, from MSDmotif at EBI
  • Genome occurence of 2VIK's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2vik__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vik] [2vik_A]
  • SWISS-PROT database: [P02640]
  • Domain organization of [VILI_CHICK] by SWISSPFAM
  • Domain found in 2VIK: [GEL ] by SMART
  • Other resources with information on 2VIK
  • Community annotation for 2VIK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science