2VME date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, GOL, HIP, PG4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, B, F, D, A, C


Primary referenceStructure determination of Discoidin II from Dictyostelium discoideum and carbohydrate binding properties of the lectin domain., Aragao KS, Satre M, Imberty A, Varrot A, Proteins. 2008 Oct;73(1):43-52. PMID:18384150
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (258 Kb) [Save to disk]
  • Biological Unit Coordinates (2vme.pdb1.gz) 129 Kb
  • Biological Unit Coordinates (2vme.pdb2.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 2VME
  • CSU: Contacts of Structural Units for 2VME
  • Likely Quarternary Molecular Structure file(s) for 2VME
  • Structure Factors (2106 Kb)
  • Retrieve 2VME in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VME from S2C, [Save to disk]
  • Re-refined 2vme structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VME in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vme] [2vme_A] [2vme_B] [2vme_C] [2vme_D] [2vme_E] [2vme_F]
  • SWISS-PROT database: [P42530]
  • Domain found in 2VME: [FA58C ] by SMART

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