2WBI Oxidoreductase date Feb 28, 2009
title Crystal Structure Of Human Acyl-Coa Dehydrogenase 11
authors J.R.C.Muniz, K.Guo, P.Savitsky, A.Roos, W.Yue, E.Pilka, F.Von Delf A.M.Edwards, C.Bountra, C.H.Arrowsmith, J.Weigelt, U.Oppermann
compound source
Molecule: Acyl-Coa Dehydrogenase Family Member 11
Chain: A, B
Fragment: Residues 355-780
Synonym: Acyl-Coa Dehydrogenase 11, Acad-11
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)-R3-Prare2
symmetry Space Group: P 31 2 1
R_factor 0.224 R_Free 0.248
crystal
cell
length a length b length c angle alpha angle beta angle gamma
128.089 128.089 129.910 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand FAD, PO4, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (2wbi.pdb1.gz) 243 Kb
  • LPC: Ligand-Protein Contacts for 2WBI
  • CSU: Contacts of Structural Units for 2WBI
  • Likely Quarternary Molecular Structure file(s) for 2WBI
  • Structure Factors (1612 Kb)
  • Retrieve 2WBI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WBI from S2C, [Save to disk]
  • Re-refined 2wbi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WBI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WBI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WBI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wbi_B] [2wbi] [2wbi_A]
  • SWISS-PROT database: [Q709F0]
  • Domain organization of [ACD11_HUMAN] by SWISSPFAM
  • Other resources with information on 2WBI
  • Community annotation for 2WBI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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