2WNT Transferase date Jul 20, 2009
title Crystal Structure Of The Human Ribosomal Protein S6 Kinase
authors J.R.C.Muniz, J.M.Elkins, J.Wang, E.Ugochukwu, E.Salah, O.King, S.P F.Von Delft, C.Bountra, C.H.Arrowsmith, J.Weigelt, A.Edwards, S.
compound source
Molecule: Ribosomal Protein S6 Kinase
Chain: A, B
Fragment: Residues 413-719
Synonym: 90 Kda Ribosomal Protein S6 Kinase 1, P90-Rsk 1, P P90s6k, Ribosomal S6 Kinase 1, Map Kinase-Activated Protein 1a, S6k-Alpha 1, Rsk-1, Mapkapk1a;
Ec: 2.7.11.1
Engineered: Yes
Other_details: Pkinase C From 341-385 And Pkinase From 418-
Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.189 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
39.660 142.910 60.960 90.00 94.90 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand CL, NA, PEG enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (202 Kb) [Save to disk]
  • Biological Unit Coordinates (2wnt.pdb1.gz) 190 Kb
  • LPC: Ligand-Protein Contacts for 2WNT
  • CSU: Contacts of Structural Units for 2WNT
  • Structure Factors (1579 Kb)
  • Retrieve 2WNT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WNT from S2C, [Save to disk]
  • Re-refined 2wnt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WNT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WNT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WNT, from MSDmotif at EBI
  • Fold representative 2wnt from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wnt_A] [2wnt] [2wnt_B]
  • SWISS-PROT database: [Q15418]
  • Domain organization of [KS6A1_HUMAN] by SWISSPFAM
  • Domain found in 2WNT: [S_TKc ] by SMART
  • Other resources with information on 2WNT
  • Community annotation for 2WNT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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