2WWE Transferase date Oct 22, 2009
title Crystal Structure Of The Phox Homology Domain Of Human Phosphoinositide-3-Kinase-C2-Gamma
authors A.K.Roos, L.Tresaugues, C.H.Arrowsmith, H.Berglund, C.Bountra, R. A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, A.Jo I.Johansson, A.Kallas, T.Karlberg, T.Kotyenova, A.Kotzch, P.Krau N.Markova, M.Moche, T.K.Nielsen, T.Nyman, C.Persson, H.Schuler, P M.I.Siponen, L.Svensson, A.G.Thorsell, S.Van Der Berg, E.Wahlbe J.Weigelt, M.Welin, M.Wisniewska, P.Nordlund, Structural Genomi Consortium (Sgc)
compound source
Molecule: Phosphoinositide-3-Kinase, Class 2, Gamma Polypep
Chain: A
Fragment: Phox Homology Domain, Residues 1203-1306
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: R3 Prare
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: P 32 2 1
R_factor 0.165 R_Free 0.184
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.420 53.420 75.130 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.25 Å
note 2WWE is a representative structure
subcellular loc. Membrane localization by OPM: Golgi membrane
luminal side
cytoplasmic side
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (2wwe.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2WWE
  • Structure Factors (539 Kb)
  • Retrieve 2WWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WWE from S2C, [Save to disk]
  • Re-refined 2wwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WWE
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2WWE, from MSDmotif at EBI
  • Fold representative 2wwe from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wwe_A] [2wwe]
  • SWISS-PROT database: [O75747]
  • Domain organization of [P3C2G_HUMAN] by SWISSPFAM
  • Domain found in 2WWE: [PX ] by SMART
  • Other resources with information on 2WWE
  • Community annotation for 2WWE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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