OCA Atlas for 2XJZ

2XJZ

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CL, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
I, K, M, J, L

Primary reference

Structure of the leukemia oncogene LMO2: implications for the assembly of a hematopoietic transcription factor complex., El Omari K, Hoosdally SJ, Tuladhar K, Karia D, Vyas P, Patient R, Porcher C, Mancini EJ, Blood. 2011 Feb 17;117(7):2146-56. Epub 2010 Nov 12. PMID:21076045

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (270 Kb) [Save to disk]

Biological Unit Coordinates (2xjz.pdb1.gz) 56 Kb

Biological Unit Coordinates (2xjz.pdb2.gz) 59 Kb

Biological Unit Coordinates (2xjz.pdb3.gz) 56 Kb

Biological Unit Coordinates (2xjz.pdb4.gz) 56 Kb

Biological Unit Coordinates (2xjz.pdb5.gz) 50 Kb

LPC: Ligand-Protein Contacts for 2XJZ

CSU: Contacts of Structural Units for 2XJZ

Structure Factors (381 Kb)

Retrieve 2XJZ in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2XJZ from S2C, [Save to disk]

Re-refined 2xjz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XJZ in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xjz] [2xjz_A] [2xjz_B] [2xjz_C] [2xjz_D] [2xjz_E] [2xjz_I] [2xjz_J] [2xjz_K] [2xjz_L] [2xjz_M]

SWISS-PROT database:

Domain found in 2XJZ: [LIM ] by SMART

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