2Y7J	Transferase	date	Jan 31, 2011
title	Structure Of Human Phosphorylase Kinase, Gamma 2
authors	J.R.C.Muniz, A.Shrestha, P.Savitsky, J.Wang, P.Rellos, O.Fedorov, N.Burgess-Brown, B.Brenner, G.Berridge, J.M.Elkins, T.Krojer, M. K.H.Che, F.Von Delft, C.H.Arrowsmith, A.M.Edwards, J.Weigelt, C. S.Knapp
compound		source
Molecule: Phosphorylase B Kinase Gamma Catalytic Chain, Testisliver Isoform; Chain: A, B, C, D Fragment: Residues 6-293 Synonym: Phosphorylase Kinase Gamma 2, Phk-Gamma-T, Psk-C3, Phosphorylase Kinase Subunit Gamma-2; Ec: 2.7.11.19 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_variant: R-La Expression_system_vector: Pnic-Zb
symmetry	Space Group: P 21 21 21	R_factor 0.1819 R_Free 0.2159
crystal cell	length a length b length c angle alpha angle beta angle gamma 87.790 91.420 164.480 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	B49 BindingDB	enzyme	Transferase E.C.2.7.11.19 BRENDA

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (396 Kb) [Save to disk] Biological Unit Coordinates (2y7j.pdb1.gz) 383 Kb LPC: Ligand-Protein Contacts for 2Y7J CSU: Contacts of Structural Units for 2Y7J Structure Factors (2436 Kb) Retrieve 2Y7J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y7J from S2C, [Save to disk] Re-refined 2y7j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y7J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz. On AstexViewer, from MSD-EBI (viewer documentation). On RasMol (Install RasMol freeware) Here's help on how to use RasMol.

Visual 3D analysis of 2Y7J

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 2Y7J, from MSDmotif at EBI Fold representative 2y7j from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y7j_A] [2y7j_B] [2y7j_C] [2y7j_D] SWISS-PROT database: Domain organization of by SWISSPFAM Alignments of the sequence of 2Y7J with the sequences similar proteins can be viewed for 2Y7J's classification at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list. A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification at ProtoMap. Click on the Cluster number.

Other resources with information on 2Y7J

Community annotation for 2Y7J at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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