2Y84		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL	enzyme
Primary reference	Crystal structures of DntR inducer binding domains in complex with salicylate offer insights into the activation of LysR-type transcriptional regulators., Devesse L, Smirnova I, Lonneborg R, Kapp U, Brzezinski P, Leonard GA, Dian C, Mol Microbiol. 2011 Jul;81(2):354-367. doi:, 10.1111/j.1365-2958.2011.07673.x. Epub 2011 Jun 22. PMID:21692874

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (274 Kb) [Save to disk] Biological Unit Coordinates (2y84.pdb1.gz) 71 Kb Biological Unit Coordinates (2y84.pdb2.gz) 71 Kb Biological Unit Coordinates (2y84.pdb3.gz) 69 Kb Biological Unit Coordinates (2y84.pdb4.gz) 71 Kb LPC: Ligand-Protein Contacts for 2Y84 CSU: Contacts of Structural Units for 2Y84 Structure Factors (399 Kb) Retrieve 2Y84 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y84 from S2C, [Save to disk] Re-refined 2y84 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y84 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y84_C] [2y84_D] [2y84_E] [2y84_F] [2y84_G] [2y84_H] [2y84] [2y84_A] [2y84_B] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---