2Y8D		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BEN, DHL	enzyme
note	2Y8D is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and Immunological Correlations between the Variable Blocks of the VAR2CSA Domain DBL6epsilon from Two Plasmodium falciparum Parasite Lines., Gangnard S, Badaut C, Ramboarina S, Baron B, Ramdani T, Gamain B, Deloron P, Lewit-Bentley A, Bentley GA, J Mol Biol. 2013 Feb 18. pii: S0022-2836(13)00100-9. doi:, 10.1016/j.jmb.2013.02.014. PMID:23429057

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk] Biological Unit Coordinates (2y8d.pdb1.gz) 50 Kb LPC: Ligand-Protein Contacts for 2Y8D CSU: Contacts of Structural Units for 2Y8D Structure Factors (561 Kb) Retrieve 2Y8D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y8D from S2C, [Save to disk] Re-refined 2y8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y8D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y8d] [2y8d_A] SWISS-PROT database:

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