2YAP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CU, MPD, MRD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray-induced catalytic active-site reduction of a multicopper oxidase: structural insights into the proton-relay mechanism and O2-reduction states., Serrano-Posada H, Centeno-Leija S, Rojas-Trejo SP, Rodriguez-Almazan C, Stojanoff V, Rudino-Pinera E, Acta Crystallogr D Biol Crystallogr. 2015 Dec 1;71(Pt 12):2396-411. doi:, 10.1107/S1399004715018714. Epub 2015 Nov 26. PMID:26627648
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (2yap.pdb1.gz) 177 Kb
  • LPC: Ligand-Protein Contacts for 2YAP
  • CSU: Contacts of Structural Units for 2YAP
  • Structure Factors (632 Kb)
  • Retrieve 2YAP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YAP from S2C, [Save to disk]
  • Re-refined 2yap structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YAP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2yap] [2yap_A]
  • SWISS-PROT database:

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