2YVK		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MRU	enzyme
Gene Ontology	Chain Function Process Component B, A, C, D
Primary reference	Crystal structure of 5-methylthioribose 1-phosphate isomerase product complex from Bacillus subtilis: Implications for catalytic mechanism., Tamura H, Saito Y, Ashida H, Inoue T, Kai Y, Yokota A, Matsumura H, Protein Sci. 2008 Jan;17(1):126-35. PMID:18156470

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (223 Kb) [Save to disk] Biological Unit Coordinates (2yvk.pdb1.gz) 110 Kb Biological Unit Coordinates (2yvk.pdb2.gz) 111 Kb LPC: Ligand-Protein Contacts for 2YVK CSU: Contacts of Structural Units for 2YVK Likely Quarternary Molecular Structure file(s) for 2YVK Structure Factors (327 Kb) Retrieve 2YVK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YVK from S2C, [Save to disk] Re-refined 2yvk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YVK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yvk] [2yvk_A] [2yvk_B] [2yvk_C] [2yvk_D] SWISS-PROT database: [O31662]

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