2GS6	Transferase	date	Apr 25, 2006
title	Crystal Structure Of The Active Egfr Kinase Domain In Comple Atp Analog-Peptide Conjugate
authors	X.Zhang, J.Gureasko, K.Shen, P.A.Cole, J.Kuriyan
compound		source
Molecule: Epidermal Growth Factor Receptor Chain: A Fragment: Kinase Domain, Residues 696-1022 Synonym: Receptor Tyrosine-Protein Kinase Erbb-1 Ec: 2.7.10.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Egfr, Erbb1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_strain: Sf9 Expression_system_vector_type: Baculorvirus Expression_system_plasmid: Pfastbac-Ht
Molecule: Peptide Chain: B Engineered: Yes		Synthetic: Yes
symmetry	Space Group: I 2 3	R_factor 0.206 R_Free 0.257
crystal cell	length a length b length c angle alpha angle beta angle gamma 144.182 144.182 144.182 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	112, CL	enzyme	Transferase E.C.2.7.10.1 BRENDA
note	2GS6 (Molecule of the Month:pdb126)
Gene Ontology	Chain Function Process Component A
Primary reference	An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor., Zhang X, Gureasko J, Shen K, Cole PA, Kuriyan J, Cell. 2006 Jun 16;125(6):1137-49. PMID:16777603

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (2gs6.pdb1.gz) 104 Kb LPC: Ligand-Protein Contacts for 2GS6 CSU: Contacts of Structural Units for 2GS6 Likely Quarternary Molecular Structure file(s) for 2GS6 Structure Factors (94 Kb) Retrieve 2GS6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GS6 from S2C, [Save to disk] Re-refined 2gs6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GS6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GS6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GS6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gs6_A] [2gs6_B] [2gs6] SWISS-PROT database: [P00533] Domain organization of [EGFR_HUMAN] by SWISSPFAM Domain found in 2GS6: [TyrKc ] by SMART

Other resources with information on 2GS6

Community annotation for 2GS6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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