2MYS Muscle Protein date Jun 27, 1996
title Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains
authors I.Rayment, H.M.Holden
compound source
Molecule: Myosin
Chain: A
Fragment: Subfragment-1
Other_details: Proteolytic Fragment Of Myosin Generated By Papain Digestion;
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Skeletal
Tissue: Pectoralis Muscle

Molecule: Myosin
Chain: B
Fragment: Subfragment-1
Other_details: Proteolytic Fragment Of Myosin Generated By Papain Digestion;

Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Skeletal
Tissue: Pectoralis Muscle

Molecule: Myosin
Chain: C
Fragment: Subfragment-1
Other_details: Proteolytic Fragment Of Myosin Generated By Papain Digestion

Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Skeletal
Tissue: Pectoralis Muscle
symmetry Space Group: C 2 2 21
R_factor 0.223 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.400 124.200 274.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand MG, MLY, SO4 enzyme
note 2MYS (Molecule of the Month:pdb18)supersedes 1MYS
related structures by homologous chain: 1W7I
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


Primary referenceThree-dimensional structure of myosin subfragment-1: a molecular motor., Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM, Science 1993 Jul 2;261(5117):50-8. PMID:8316857
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (2mys.pdb1.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 2MYS
  • CSU: Contacts of Structural Units for 2MYS
  • Likely Quarternary Molecular Structure file(s) for 2MYS
  • Retrieve 2MYS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2MYS from S2C, [Save to disk]
  • View 2MYS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2MYS
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2MYS, from MSDmotif at EBI
  • Genome occurence of 2MYS's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2mysa1, region A:34-79 [Jmol] [rasmolscript] [script source]
        - Domain d2mysa2, region A:4-33,A:80-843 [Jmol] [rasmolscript] [script source]
        - Domain d2mysb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d2mysc_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 2mys from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2mys_C] [2mys_A] [2mys_B] [2mys]
  • SWISS-PROT database: [P02604] [P02609] [P13538]
  • Domain organization of [MLE1_CHICK] [MLRS_CHICK] [MYSS_CHICK] by SWISSPFAM
  • Domains found in 2MYS: [EFh] [IQ] [MYSc ] by SMART
  • Other resources with information on 2MYS
  • Community annotation for 2MYS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 2MYS from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science