3A7J Transferase date Sep 27, 2009
title Human Mst3 Kinase In Complex With Mnadp
authors T.P.Ko, W.Y.Jeng, C.I.Liu, M.D.Lai, A.H.J.Wang
compound source
Molecule: Serinethreonine Kinase 24 (Ste20 Homolog, Yeast)
Chain: A
Fragment: N-Terminal Kinase Domain (Unp Residues 1-303)
Synonym: Mst3 Kinase
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Gene: Stk24
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Arcticexpress(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-32 Xalic
symmetry Space Group: P 1 21 1
R_factor 0.186 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.816 53.527 60.634 90.00 109.95 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand ADP, MN, TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of human MST3 kinase in complex with adenine, ADP and Mn2+., Ko TP, Jeng WY, Liu CI, Lai MD, Wu CL, Chang WJ, Shr HL, Lu TJ, Wang AH, Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):145-54. Epub 2010 Jan 22. PMID:20124694
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (3a7j.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 3A7J
  • CSU: Contacts of Structural Units for 3A7J
  • Structure Factors (455 Kb)
  • Retrieve 3A7J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3A7J from S2C, [Save to disk]
  • Re-refined 3a7j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3A7J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3A7J
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3A7J, from MSDmotif at EBI
  • Fold representative 3a7j from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3a7j] [3a7j_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3A7J: [S_TKc ] by SMART
  • Other resources with information on 3A7J
  • Community annotation for 3A7J at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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