3AQ1 Chaperone date Oct 24, 2010
title Open State Monomer Of A Group II Chaperonin From Methanococc Burtonii
authors S.J.Harrop, O.Pilak, K.S.Siddiqui, D.De Francisci, D.Burg, T.J.Wi R.Cavicchioli, P.M.Curmi
compound source
Molecule: Thermosome Subunit
Chain: B
Synonym: Group II Chaperonin
Engineered: Yes
Organism_scientific: Methanococcoides Burtonii
Organism_taxid: 259564
Strain: Dsm 6242
Gene: Mbur_1960
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.190 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.564 115.256 193.864 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.75 Å
Gene MBUR
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceChaperonins from an Antarctic archaeon are predominantly monomeric: crystal structure of an open state monomer., Pilak O, Harrop SJ, Siddiqui KS, Chong K, De Francisci D, Burg D, Williams TJ, Cavicchioli R, Curmi PM, Environ Microbiol. 2011 Apr 7. doi: 10.1111/j.1462-2920.2011.02477.x. PMID:21477108
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk]
  • Biological Unit Coordinates (3aq1.pdb1.gz) 131 Kb
  • Biological Unit Coordinates (3aq1.pdb2.gz) 259 Kb
  • CSU: Contacts of Structural Units for 3AQ1
  • Structure Factors (146 Kb)
  • Retrieve 3AQ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3AQ1 from S2C, [Save to disk]
  • Re-refined 3aq1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3AQ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3AQ1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3AQ1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3aq1] [3aq1_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3AQ1
  • Community annotation for 3AQ1 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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