3B0X date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CL, DGT, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA., Nakane S, Ishikawa H, Nakagawa N, Kuramitsu S, Masui R, J Mol Biol. 2012 Mar 30;417(3):179-96. Epub 2012 Jan 27. PMID:22306405
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (3b0x.pdb1.gz) 198 Kb
  • LPC: Ligand-Protein Contacts for 3B0X
  • CSU: Contacts of Structural Units for 3B0X
  • Structure Factors (1551 Kb)
  • Retrieve 3B0X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B0X from S2C, [Save to disk]
  • Re-refined 3b0x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B0X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b0x_A] [3b0x]
  • SWISS-PROT database:
  • Domains found in 3B0X: [HhH1] [POLIIIAc] [POLXc ] by SMART

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