3B6V Motor Protein date Oct 29, 2007
title Crystal Structure Of The Motor Domain Of Human Kinesin Famil 3c In Complex With Adp
authors H.Zhu, W.Tempel, Y.Shen, R.Landry, C.H.Arrowsmith, A.M.Edwards, M.Sundstrom, J.Weigelt, A.Bochkarev, H.Park, Structural Genomic Consortium (Sgc)
compound source
Molecule: Kinesin-Like Protein Kif3c
Chain: A, B
Fragment: Motor Domain: Residues 7-383
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kif3c
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon(+) Ril
Expression_system_plasmid: Pet28-Mhp
symmetry Space Group: C 1 2 1
R_factor 0.202 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
135.739 47.588 116.951 90.00 103.16 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand ADP, MG, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (3b6v.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (3b6v.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 3B6V
  • CSU: Contacts of Structural Units for 3B6V
  • Likely Quarternary Molecular Structure file(s) for 3B6V
  • Structure Factors (312 Kb)
  • Retrieve 3B6V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B6V from S2C, [Save to disk]
  • Re-refined 3b6v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B6V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3B6V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3B6V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b6v] [3b6v_B] [3b6v_A]
  • SWISS-PROT database: [O14782]
  • Domain organization of [KIF3C_HUMAN] by SWISSPFAM
  • Domain found in 3B6V: [KISc ] by SMART
  • Other resources with information on 3B6V
  • Community annotation for 3B6V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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