3B8W date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand KCX, PLP, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, B, C


Primary referenceResidues Asp164 and Glu165 at the substrate entryway function potently in substrate orientation of alanine racemase from E. coli: Enzymatic characterization with crystal structure analysis., Wu D, Hu T, Zhang L, Chen J, Du J, Ding J, Jiang H, Shen X, Protein Sci. 2008 Jun;17(6):1066-76. Epub 2008 Apr 23. PMID:18434499
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk]
  • Biological Unit Coordinates (3b8w.pdb1.gz) 117 Kb
  • Biological Unit Coordinates (3b8w.pdb2.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 3B8W
  • CSU: Contacts of Structural Units for 3B8W
  • Likely Quarternary Molecular Structure file(s) for 3B8W
  • Structure Factors (495 Kb)
  • Retrieve 3B8W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3B8W from S2C, [Save to disk]
  • Re-refined 3b8w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3B8W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3b8w] [3b8w_A] [3b8w_B] [3b8w_C] [3b8w_D]
  • SWISS-PROT database: [P0A6B4]
  • Domain found in 3B8W: [Ala_racemase_C ] by SMART

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