3BRE Signaling Protein date Dec 21, 2007
title Crystal Structure Of P.Aeruginosa Pa3702
authors N.De, M.Pirruccello, P.V.Krasteva, N.Bae, R.V.Raghavan, H.Sonderm
compound source
Molecule: Probable Two-Component Response Regulator
Chain: A, B
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Gene: Wspr
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21a
symmetry Space Group: C 1 2 1
R_factor 0.242 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
144.510 72.748 106.095 90.00 110.79 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand C2E, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePhosphorylation-independent regulation of the diguanylate cyclase WspR., De N, Pirruccello M, Krasteva PV, Bae N, Raghavan RV, Sondermann H, PLoS Biol. 2008 Mar 25;6(3):e67. PMID:18366254
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (110 Kb) [Save to disk]
  • Biological Unit Coordinates (3bre.pdb1.gz) 104 Kb
  • Biological Unit Coordinates (3bre.pdb2.gz) 205 Kb
  • LPC: Ligand-Protein Contacts for 3BRE
  • CSU: Contacts of Structural Units for 3BRE
  • Likely Quarternary Molecular Structure file(s) for 3BRE
  • Structure Factors (747 Kb)
  • Retrieve 3BRE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3BRE from S2C, [Save to disk]
  • Re-refined 3bre structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3BRE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3BRE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3BRE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3bre_B] [3bre_A] [3bre]
  • SWISS-PROT database: [A3LEF6]
  • Domain organization of [A3LEF6_PSEAE] by SWISSPFAM
  • Domains found in 3BRE: [GGDEF] [REC ] by SMART
  • Other resources with information on 3BRE
  • Community annotation for 3BRE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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