3CM8 A RNA polymerase subunit structure from virus date
authors He, X., Zhou, J., Zeng, Z., Ma, J., Zhang, R., Rao, Z., Liu, Y.
compound source
R_Free 0.261
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90


Primary referenceCrystal structure of the polymerase PA(C)-PB1(N) complex from an avian influenza H5N1 virus., He X, Zhou J, Bartlam M, Zhang R, Ma J, Lou Z, Li X, Li J, Joachimiak A, Zeng Z, Ge R, Rao Z, Liu Y, Nature. 2008 Aug 28;454(7208):1123-6. Epub 2008 Jul 9. PMID:18615018
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (3cm8.pdb1.gz) 76 Kb
  • CSU: Contacts of Structural Units for 3CM8
  • Likely Quarternary Molecular Structure file(s) for 3CM8
  • Structure Factors (170 Kb)
  • Retrieve 3CM8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3CM8 from S2C, [Save to disk]
  • Re-refined 3cm8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3CM8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3CM8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3CM8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3cm8_A] [3cm8_B] [3cm8]
  • SWISS-PROT database: [Q9EA60] [Q9WLS3]
  • Domain organization of [Q9EA60_9INFA] [RDRP_I97A1] by SWISSPFAM
  • Other resources with information on 3CM8
  • Community annotation for 3CM8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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