3D5U		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A
Primary reference	Structures of the wild-type and activated catalytic domains of Brachydanio rerio Polo-like kinase 1 (Plk1): changes in the active-site conformation and interactions with ligands., Elling RA, Fucini RV, Romanowski MJ, Acta Crystallogr D Biol Crystallogr. 2008 Sep;64(Pt 9):909-18. Epub 2008, Aug 13. PMID:18703838

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk] Biological Unit Coordinates (3d5u.pdb1.gz) 47 Kb CSU: Contacts of Structural Units for 3D5U Likely Quarternary Molecular Structure file(s) for 3D5U Structure Factors (82 Kb) Retrieve 3D5U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D5U from S2C, [Save to disk] Re-refined 3d5u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D5U in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d5u] [3d5u_A] SWISS-PROT database: [Q6DRK7] Domain found in 3D5U: [S_TKc ] by SMART

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