3D8B Hydrolase date May 23, 2008
title Crystal Structure Of Human Fidgetin-Like Protein 1 In Comple
authors T.Karlberg, M.Wisniewska, J.Andersson, C.H.Arrowsmith, H.Berglun R.D.Busam, R.Collins, L.G.Dahlgren, A.M.Edwards, S.Flodin, A.Flo S.Graslund, M.Hammarstrom, A.Johansson, I.Johansson, A.Kallas, T.Kotenyova, L.Lehtio, M.Moche, M.E.Nilsson, P.Nordlund, T.Nyman K.Olesen, C.Persson, J.Sagemark, A.G.Thorsell, L.Tresaugues, S.V Berg, M.Welin, M.Wikstrom, H.Schuler, Structural Genomics Conso (Sgc)
compound source
Molecule: Fidgetin-Like Protein 1
Chain: A, B
Fragment: Aaa+ Atpase Domain: Residues 341-674
Ec: 3.6.4.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
Gene: Fignl1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) R3 Prare
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Bsa4
symmetry Space Group: P 41 21 2
R_factor 0.197 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.430 85.430 197.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ADP enzyme Hydrolase E.C.3.6.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (3d8b.pdb1.gz) 92 Kb
  • LPC: Ligand-Protein Contacts for 3D8B
  • CSU: Contacts of Structural Units for 3D8B
  • Likely Quarternary Molecular Structure file(s) for 3D8B
  • Structure Factors (382 Kb)
  • Retrieve 3D8B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3D8B from S2C, [Save to disk]
  • Re-refined 3d8b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3D8B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3D8B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3D8B, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3d8b_B] [3d8b] [3d8b_A]
  • SWISS-PROT database: [Q6PIW4]
  • Domain organization of [FIGL1_HUMAN] by SWISSPFAM
  • Domain found in 3D8B: [AAA ] by SMART
  • Other resources with information on 3D8B
  • Community annotation for 3D8B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science