3D9N		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SEP, SO4	enzyme
note	3D9N is a representative structure
Primary reference	Snapshots of the RNA processing factor SCAF8 bound to different phosphorylated forms of the carboxy-terminal domain of RNA-polymerase II., Becker R, Loll B, Meinhart A, J Biol Chem. 2008 Jun 11. PMID:18550522

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (3d9n.pdb1.gz) 28 Kb Biological Unit Coordinates (3d9n.pdb2.gz) 29 Kb LPC: Ligand-Protein Contacts for 3D9N CSU: Contacts of Structural Units for 3D9N Likely Quarternary Molecular Structure file(s) for 3D9N Structure Factors (326 Kb) Retrieve 3D9N in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3D9N from S2C, [Save to disk] Re-refined 3d9n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3D9N in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3d9n] [3d9n_A] [3d9n_B] [3d9n_Y] [3d9n_Z] SWISS-PROT database: [Q9UPN6] Domain found in 3D9N: [RPR ] by SMART

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