3DPK		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8C5, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Pyrido[2,3-d]pyrimidin-5-ones: A Novel Class of Antiinflammatory Macrophage Colony-Stimulating Factor-1 Receptor Inhibitors (dagger)., Huang H, Hutta DA, Rinker JM, Hu H, Parsons WH, Schubert C, Desjarlais RL, Crysler CS, Chaikin MA, Donatelli RR, Chen Y, Cheng D, Zhou Z, Yurkow E, Manthey CL, Player MR, J Med Chem. 2009 Feb 4. PMID:19193011

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (3dpk.pdb1.gz) 90 Kb LPC: Ligand-Protein Contacts for 3DPK CSU: Contacts of Structural Units for 3DPK Likely Quarternary Molecular Structure file(s) for 3DPK Structure Factors (207 Kb) Retrieve 3DPK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DPK from S2C, [Save to disk] Re-refined 3dpk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DPK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dpk] [3dpk_A] SWISS-PROT database: [P07333] Domain found in 3DPK: [TyrKc ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---