3DYP		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	DMS, MG, NA	enzyme
Gene Ontology	Chain Function Process Component A, C, B, D
Primary reference	Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli)., Juers DH, Rob B, Dugdale ML, Rahimzadeh N, Giang C, Lee M, Matthews BW, Huber RE, Protein Sci. 2009 Jun;18(6):1281-92. PMID:19472413

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (744 Kb) [Save to disk] Biological Unit Coordinates (3dyp.pdb1.gz) 731 Kb LPC: Ligand-Protein Contacts for 3DYP CSU: Contacts of Structural Units for 3DYP Likely Quarternary Molecular Structure file(s) for 3DYP Structure Factors (3916 Kb) Retrieve 3DYP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3DYP from S2C, [Save to disk] Re-refined 3dyp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3DYP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3dyp] [3dyp_A] [3dyp_B] [3dyp_C] [3dyp_D] SWISS-PROT database: [P00722] Domain found in 3DYP: [Bgal_small_N ] by SMART

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