3E7G Oxidoreductase date Aug 18, 2008
title Structure Of Human Inosox With Inhibitor Ar-C95791
authors E.D.Garcin, A.S.Arvai, R.J.Rosenfeld, M.D.Kroeger, B.R.Crane, G.Andersson, G.Andrews, P.J.Hamley, P.R.Mallinder, D.J.Nicholls S.A.St-Gallay, A.C.Tinker, N.P.Gensmantel, A.Mete, D.R.Cheshire S.Connolly, D.J.Stueh, A.Aberg, A.V.Wallace, J.A.Tainer, E.D.Getzoff
compound source
Molecule: Nitric Oxide Synthase, Inducible
Chain: A, B, C, D
Fragment: Unp Residues 82-505
Synonym: Inducible No Synthase, Inducible Nos, Inos, Nos Type II, Hepatocyte Nos, Hep-Nos;
Ec: 1.14.13.39
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
symmetry Space Group: P 21 21 21
R_factor 0.182 R_Free 0.213
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.206 158.671 191.141 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand AT2, H4B, HEM, ZN BindingDB enzyme Oxidoreductase E.C.1.14.13.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceAnchored plasticity opens doors for selective inhibitor design in nitric oxide synthase., Garcin ED, Arvai AS, Rosenfeld RJ, Kroeger MD, Crane BR, Andersson G, Andrews G, Hamley PJ, Mallinder PR, Nicholls DJ, St-Gallay SA, Tinker AC, Gensmantel NP, Mete A, Cheshire DR, Connolly S, Stuehr DJ, Aberg A, Wallace AV, Tainer JA, Getzoff ED, Nat Chem Biol. 2008 Nov;4(11):700-7. Epub 2008 Oct 12. PMID:18849972
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (300 Kb) [Save to disk]
  • Biological Unit Coordinates (3e7g.pdb1.gz) 149 Kb
  • Biological Unit Coordinates (3e7g.pdb2.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 3E7G
  • CSU: Contacts of Structural Units for 3E7G
  • Likely Quarternary Molecular Structure file(s) for 3E7G
  • Structure Factors (1921 Kb)
  • Retrieve 3E7G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3E7G from S2C, [Save to disk]
  • Re-refined 3e7g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3E7G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3E7G
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 3E7G, from MSDmotif at EBI
  • Fold representative 3e7g from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3e7g_B] [3e7g_A] [3e7g_D] [3e7g_C] [3e7g]
  • SWISS-PROT database: [P35228]
  • Domain organization of [NOS2_HUMAN] by SWISSPFAM
  • Alignments of the sequence of 3E7G with the sequences similar proteins can be viewed for 3E7G's classification [NOS2_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [NOS2_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 3E7G
  • Community annotation for 3E7G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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