3F70	Transcription Regulator	date	Nov 07, 2008
title	Crystal Structure Of L3mbtl2-H4k20me1 Complex
authors	Y.Guo, C.Qi, A.Allali-Hassani, P.Pan, H.Zhu, A.Dong, F.Mackenzie, L P.Loppnau, I.Kozieradzki, M.Vedadi, A.M.Edwards, J.Weigelt, C.Bo C.H.Arrowsmith, A.Botchkarev, R.Read, J.Min, Structural Genomic Consortium (Sgc)
compound		source
Molecule: Lethal(3)Malignant Brain Tumor-Like 2 Protein Chain: A, B Synonym: L(3)Mbt-Like 2 Protein, H-L(3)Mbt-Like Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: L3mbtl2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.199 R_Free 0.268
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.590 55.489 324.101 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	MLZ	enzyme
note	3F70 supersedes 3DBB
Gene Ontology	Chain Function Process Component A, B
Primary reference	Methylation-state-specific recognition of histones by the MBT repeat protein L3MBTL2., Guo Y, Nady N, Qi C, Allali-Hassani A, Zhu H, Pan P, Adams-Cioaba MA, Amaya MF, Dong A, Vedadi M, Schapira M, Read RJ, Arrowsmith CH, Min J, Nucleic Acids Res. 2009 Apr;37(7):2204-10. Epub 2009 Feb 20. PMID:19233876

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk] Biological Unit Coordinates (3f70.pdb1.gz) 131 Kb LPC: Ligand-Protein Contacts for 3F70 CSU: Contacts of Structural Units for 3F70 Likely Quarternary Molecular Structure file(s) for 3F70 Structure Factors (777 Kb) Retrieve 3F70 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3F70 from S2C, [Save to disk] Re-refined 3f70 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3F70 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3F70

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3F70, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3f70_A] [3f70] [3f70_B] SWISS-PROT database: [Q969R5] Domain organization of [LMBL2_HUMAN] by SWISSPFAM Domain found in 3F70: [MBT ] by SMART

Other resources with information on 3F70

Community annotation for 3F70 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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